plot_cell_percentages — plot_cell_percentages • SPIAT

Plots cells proportions as barplots.

Usage

plot_cell_percentages(
  cell_proportions,
  cells_to_exclude = NULL,
  cellprop_colname = "Proportion_name"
)

Arguments

cell_proportions: Data Frame. Output from calculate_cell_proportions.
cells_to_exclude: String Vector. Markers to exclude.
cellprop_colname: String. Column to use for y axis names. Default is "Proportion_name".

Value

A plot is returned

Examples

p_cells <- calculate_cell_proportions(SPIAT::simulated_image)

plot_cell_percentages(p_cells)